59 lines
1.4 KiB
Plaintext
59 lines
1.4 KiB
Plaintext
set -e
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#
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# run normal mode
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#
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echo ''
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$NXF_RUN | tee stdout
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[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > hola'` == 12 ]] || false
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[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > foo'` == 2 ]] || false
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grep 'x: 1; y: Ciao; z: alpha' stdout
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grep 'x: 1; y: Ciao; z: beta' stdout
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grep 'x: 1; y: Ciao; z: delta' stdout
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grep 'x: 1; y: Hola; z: alpha' stdout
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grep 'x: 1; y: Hola; z: beta' stdout
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grep 'x: 1; y: Hola; z: delta' stdout
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grep 'x: 2; y: Ciao; z: alpha' stdout
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grep 'x: 2; y: Ciao; z: beta' stdout
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grep 'x: 2; y: Ciao; z: delta' stdout
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grep 'x: 2; y: Hola; z: alpha' stdout
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grep 'x: 2; y: Hola; z: beta' stdout
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grep 'x: 2; y: Hola; z: delta' stdout
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grep -F 'foo [a, b]' stdout
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grep -F 'foo [c, d]' stdout
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#
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# RESUME mode
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#
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echo ''
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$NXF_RUN -resume | tee stdout
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[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > hola'` == 12 ]] || false
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[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > foo'` == 2 ]] || false
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grep 'x: 1; y: Ciao; z: alpha' stdout
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grep 'x: 1; y: Ciao; z: beta' stdout
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grep 'x: 1; y: Ciao; z: delta' stdout
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grep 'x: 1; y: Hola; z: alpha' stdout
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grep 'x: 1; y: Hola; z: beta' stdout
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grep 'x: 1; y: Hola; z: delta' stdout
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grep 'x: 2; y: Ciao; z: alpha' stdout
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grep 'x: 2; y: Ciao; z: beta' stdout
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grep 'x: 2; y: Ciao; z: delta' stdout
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grep 'x: 2; y: Hola; z: alpha' stdout
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grep 'x: 2; y: Hola; z: beta' stdout
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grep 'x: 2; y: Hola; z: delta' stdout
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grep -F 'foo [a, b]' stdout
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grep -F 'foo [c, d]' stdout
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