Update nextflow.config

This commit is contained in:
2026-08-23 22:17:11 +02:00
parent 1519b28187
commit e5a9211b67

View File

@@ -1,11 +1,17 @@
nextflow {
plugins { plugins {
id 'nf-k8s' registry = 'https://recreational.tech/plugins/'
}
}
plugins {
id 'k8s-dvfs@0.1.0'
} }
workDir = '/workspace' workDir = '/workspace'
process { process {
executor = 'k8s' executor = 'k8s-dvfs'
container = 'ubuntu:22.04' container = 'ubuntu:22.04'
pod = [ pod = [
@@ -20,16 +26,21 @@ k8s {
storageMountPath = '/workspace' storageMountPath = '/workspace'
launchDir = '/workspace/launch' launchDir = '/workspace/launch'
projectDir = '/workspace/projects' projectDir = '/workspace/projects'
cleanup = false cleanup = true
nextflowImage = 'gitea.kleine.eulenhexe.de/kevin/ma/nextflow-dvfs:0.1'
imagePullPolicy = 'IfNotPresent' imagePullPolicy = 'IfNotPresent'
schedulerInterval = '1m'
recordTaskRuntimes = true
schedulingStrategy = 'DVFS'
runtimeComparisonEpsilon = '10s'
dvfsSchedulingNumTopRuntimes = 3
nodeInit { nodeInit {
enabled = false enabled = true
image = 'gitea.kleine.eulenhexe.de/kevin/ma/dvfs-agent:0.1' image = 'gitea.kleine.eulenhexe.de/kevin/ma/dvfs-agent:0.2.0'
command = ['/bin/agent'] command = ['/usr/local/bin/agent']
wait = 'Running' wait = 'Running'
cleanup = false cleanup = true
} }
} }