24 lines
699 B
Plaintext
24 lines
699 B
Plaintext
set -e
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#
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# run normal mode
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#
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$NXF_RUN -c .config | tee stdout
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[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > task1'` == 3 ]] || false
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[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > task2'` == 3 ]] || false
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[[ `grep 'NOTE' .nextflow.log | grep -E -c "Process .* terminated with an error exit status"` == 3 ]] || false
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#
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# RESUME mode
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#
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echo ''
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$NXF_RUN -c .config -resume | tee stdout
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[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > task1'` == 3 ]] || false
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[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > task2'` == 3 ]] || false
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[[ `grep 'NOTE' .nextflow.log | grep -E -c "Process .* terminated with an error exit status"` == 3 ]] || false
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