Files
ma/nextflow/tests-v1/config-vars.nf
2026-04-29 23:01:54 +02:00

51 lines
1000 B
Plaintext

#!/usr/bin/env nextflow
/*
* Copyright 2013-2024, Seqera Labs
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
/*
* Verify that variable defined in the configuration file
* context can be accessed in the process script
*
* author Emilio Palumbo
*/
process foo {
debug true
script:
t = task.ext.out.join(',')
"""
echo foo ${t}
"""
}
process bar {
debug true
shell:
t = task.ext.out.join(',')
'''
echo bar !{t}
'''
}
workflow {
foo()
bar()
}