28 lines
666 B
Plaintext
28 lines
666 B
Plaintext
set -e
|
|
|
|
#
|
|
# run normal mode
|
|
#
|
|
echo ''
|
|
$NXF_RUN | tee stdout
|
|
|
|
[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > foo'` == 2 ]] || false
|
|
|
|
[[ `grep -c '1 - a' stdout` == 1 ]] || false
|
|
[[ `grep -c '1 - b' stdout` == 1 ]] || false
|
|
[[ `grep -c 'foo out: a' stdout` == 1 ]] || false
|
|
[[ `grep -c 'foo out: b' stdout` == 1 ]] || false
|
|
|
|
|
|
#
|
|
# RESUME mode
|
|
#
|
|
echo ''
|
|
$NXF_RUN -resume | tee stdout
|
|
|
|
[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > foo'` == 2 ]] || false
|
|
|
|
[[ `grep -c '1 - a' stdout` == 1 ]] || false
|
|
[[ `grep -c '1 - b' stdout` == 1 ]] || false
|
|
[[ `grep -c 'foo out: a' stdout` == 1 ]] || false
|
|
[[ `grep -c 'foo out: b' stdout` == 1 ]] || false |