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ma/nextflow/docs/reference/stdlib-groovy.md
2026-04-29 23:01:54 +02:00

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(stdlib-groovy)=

Groovy and Java classes

Any Groovy or Java class that is available to Nextflow at runtime can be used in a Nextflow script. The following classes are imported by default:

  • groovy.lang.*
  • groovy.util.*
  • java.io.*
  • java.lang.*
  • java.math.BigDecimal
  • java.math.BigInteger
  • java.net.*
  • java.util.*

All other classes must be referenced by their fully-qualified name:

def vals = [1, 2, 3]
println groovy.json.JsonOutput.toJson(vals)

:::{note} The set of classes in Nextflow's runtime classpath can change between different Nextflow versions. As a best practice, any code that uses classes outside the Nextflow standard library should either be refactored to only use the Nextflow standard library or be refactored as a {ref}plugin <dev-plugins-page> with explicit dependencies. :::