22 lines
564 B
Plaintext
22 lines
564 B
Plaintext
set -e
|
|
|
|
#
|
|
# run normal mode
|
|
#
|
|
$NXF_RUN | tee .stdout
|
|
|
|
[[ `grep -c 'Submitted process > blastThemAll' .nextflow.log` == 3 ]] || false
|
|
[[ `grep -c 'p1.fa p2.fa' .stdout` == 1 ]] || false
|
|
[[ `grep -c 'p3.fa p4.fa' .stdout` == 1 ]] || false
|
|
[[ `grep -c 'p5.fa' .stdout` == 1 ]] || false
|
|
|
|
#
|
|
# run resume mode
|
|
#
|
|
$NXF_RUN -resume | tee .stdout
|
|
|
|
[[ `grep -c 'Cached process > blastThemAll' .nextflow.log` == 3 ]] || false
|
|
[[ `grep -c 'p1.fa p2.fa' .stdout` == 1 ]] || false
|
|
[[ `grep -c 'p3.fa p4.fa' .stdout` == 1 ]] || false
|
|
[[ `grep -c 'p5.fa' .stdout` == 1 ]] || false
|