set -e # # run normal mode # echo '' $NXF_RUN | tee stdout [[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > foo'` == 1 ]] || false [[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > bar'` == 1 ]] || false [[ `< stdout grep -E 'foo.*/a/a/2\.txt' ` ]] || false [[ `< stdout grep -E 'bar.*/a/a/2\.txt' ` ]] || false # # RESUME mode # echo '' $NXF_RUN -resume | tee stdout [[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > foo'` == 1 ]] || false [[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > bar'` == 1 ]] || false [[ `< stdout grep -E 'foo.*/a/a/2\.txt' ` ]] || false [[ `< stdout grep -E 'bar.*/a/a/2\.txt' ` ]] || false