scattered: [chr1, /path/to/region1_chr1.vcf] scattered: [chr1, /path/to/region2_chr1.vcf] scattered: [chr2, /path/to/region1_chr2.vcf] scattered: [chr2, /path/to/region2_chr2.vcf] scattered: [chr2, /path/to/region3_chr2.vcf] gathered: [chr1, [/path/to/region1_chr1.vcf, /path/to/region2_chr1.vcf]] gathered: [chr2, [/path/to/region1_chr2.vcf, /path/to/region2_chr2.vcf, /path/to/region3_chr2.vcf]]