function count_hello() { rm -rf hello aws s3 cp --only-show-errors s3://nextflow-ci/work/ci-test/publish-s3/HELLO.tsv hello && < hello grep 'Hello, world' -c } # Skip test if AWS keys are missing if [ -z "$AWS_ACCESS_KEY_ID" ]; then echo "Missing AWS credentials -- Skipping test" exit 0 fi # # run normal mode # $NXF_RUN | tee .stdout [[ `grep INFO .nextflow.log | grep -c 'Submitted process'` == 1 ]] || false # # run resume mode # $NXF_RUN -resume | tee .stdout [[ `grep INFO .nextflow.log | grep -c 'Cached process'` == 1 ]] || false