set -e

#
# run normal mode
#
echo ''
$NXF_RUN | tee stdout

[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > foo (p1.fa)'` == 1 ]] || false
[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > foo (p2.fa)'` == 1 ]] || false
[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > foo (p3.fa)'` == 1 ]] || false

[[ `< stdout grep -c '>1ycsB'` == 2 ]] || false
[[ `< stdout grep -c '>1pht'` == 2 ]]  || false
[[ `< stdout grep -c '>1aboA'` == 1 ]] || false
[[ `< stdout grep -c '>1ihvA'` == 1 ]] || false
[[ `< stdout grep -c '>1vie'` == 1 ]]  || false



#
# run resume mode
#
echo ''
$NXF_RUN -resume | tee stdout

[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > foo (p1.fa)'` == 1 ]] || false
[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > foo (p2.fa)'` == 1 ]] || false
[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > foo (p3.fa)'` == 1 ]] || false

[[ `< stdout grep -c '>1ycsB'` == 2 ]] || false
[[ `< stdout grep -c '>1pht'` == 2 ]]  || false
[[ `< stdout grep -c '>1aboA'` == 1 ]] || false
[[ `< stdout grep -c '>1ihvA'` == 1 ]] || false
[[ `< stdout grep -c '>1vie'` == 1 ]]  || false