set -e

#
# run normal mode 
#
$NXF_RUN | tee stdout

[[ `grep INFO .nextflow.log | grep -c 'Submitted process'` == 1 ]] || false
< stdout grep 'link_1.fasta' 
< stdout grep 'link_2.fasta'
< stdout grep 'link_3.fasta'  
< stdout grep 'alpha.txt'
< stdout grep 'beta.txt'
 

#
# run resume mode 
#
$NXF_RUN -resume | tee stdout

[[ `grep INFO .nextflow.log | grep -c 'Cached process'` == 1 ]] || false
< stdout grep 'link_1.fasta' 
< stdout grep 'link_2.fasta'
< stdout grep 'link_3.fasta'  
< stdout grep 'alpha.txt'
< stdout grep 'beta.txt'