add nextflow d30e48d

nextflow/tests-v1/config-vars.nf

@@ -0,0 +1,50 @@
+#!/usr/bin/env nextflow
+/*
+ * Copyright 2013-2024, Seqera Labs
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+/*
+ * Verify that variable defined in the configuration file
+ * context can be accessed in the process script
+ *
+ * author Emilio Palumbo
+ */
+
+process foo {
+  debug true
+ 
+  script:
+  t = task.ext.out.join(',')
+  """
+  echo foo ${t}
+  """
+ 
+}
+
+process bar {
+  debug true
+ 
+  shell:
+  t = task.ext.out.join(',')
+  
+  '''
+  echo bar !{t}
+  '''
+}
+
+workflow {
+  foo()
+  bar()
+}