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add nextflow d30e48d

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Kevin
2026-04-29 23:01:54 +02:00
parent d0b12d668d
commit 97cc9058d3
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24
nextflow/tests-v1/checks/task-escape-path.nf/.checks Normal file
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set -e
$NXF_RUN | tee stdout
[[ `grep INFO .nextflow.log | grep -c 'Submitted process > foo1'` == 1 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Submitted process > foo2'` == 1 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Submitted process > foo3'` == 1 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Submitted process > foo4'` == 1 ]] || false
[[ `< stdout grep -F -c 'FOO1: file\ AA.txt; file1.txt file2.txt fil\ BB.txt'` == 1 ]] || false
[[ `< stdout grep -F -c 'FOO2: file\ AA.txt; file1.txt file2.txt fil\ BB.txt'` == 1 ]] || false
[[ `< stdout grep -F -c 'FOO3: file\ AA.txt; file1.txt file2.txt fil\ BB.txt'` == 1 ]] || false
[[ `< stdout grep -F -c 'FOO4: file\ AA.txt; file1.txt file2.txt fil\ BB.txt'` == 1 ]] || false
## resume
$NXF_RUN -resume | tee stdout
[[ `grep INFO .nextflow.log | grep -c 'Cached process > foo1'` == 1 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Cached process > foo2'` == 1 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Cached process > foo3'` == 1 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Cached process > foo4'` == 1 ]] || false
[[ `< stdout grep -F -c 'FOO1: file\ AA.txt; file1.txt file2.txt fil\ BB.txt'` == 1 ]] || false
[[ `< stdout grep -F -c 'FOO2: file\ AA.txt; file1.txt file2.txt fil\ BB.txt'` == 1 ]] || false
[[ `< stdout grep -F -c 'FOO3: file\ AA.txt; file1.txt file2.txt fil\ BB.txt'` == 1 ]] || false
[[ `< stdout grep -F -c 'FOO4: file\ AA.txt; file1.txt file2.txt fil\ BB.txt'` == 1 ]] || false