kevin/ma
1
0
Fork 0
Code Issues 1 Packages Activity

add nextflow d30e48d

Browse Source
This commit is contained in:
Kevin
2026-04-29 23:01:54 +02:00
parent d0b12d668d
commit 97cc9058d3
2840 changed files with 730250 additions and 0 deletions
Download Patch File Download Diff File Expand all files Collapse all files

58
nextflow/tests-v1/checks/repeaters.nf/.checks Normal file
View File

@@ -0,0 +1,58 @@
set -e
#
# run normal mode
#
echo ''
$NXF_RUN | tee stdout
[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > hola'` == 12 ]] || false
[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process > foo'` == 2 ]] || false
grep 'x: 1; y: Ciao; z: alpha' stdout
grep 'x: 1; y: Ciao; z: beta' stdout
grep 'x: 1; y: Ciao; z: delta' stdout
grep 'x: 1; y: Hola; z: alpha' stdout
grep 'x: 1; y: Hola; z: beta' stdout
grep 'x: 1; y: Hola; z: delta' stdout
grep 'x: 2; y: Ciao; z: alpha' stdout
grep 'x: 2; y: Ciao; z: beta' stdout
grep 'x: 2; y: Ciao; z: delta' stdout
grep 'x: 2; y: Hola; z: alpha' stdout
grep 'x: 2; y: Hola; z: beta' stdout
grep 'x: 2; y: Hola; z: delta' stdout
grep -F 'foo [a, b]' stdout
grep -F 'foo [c, d]' stdout
#
# RESUME mode
#
echo ''
$NXF_RUN -resume | tee stdout
[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > hola'` == 12 ]] || false
[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process > foo'` == 2 ]] || false
grep 'x: 1; y: Ciao; z: alpha' stdout
grep 'x: 1; y: Ciao; z: beta' stdout
grep 'x: 1; y: Ciao; z: delta' stdout
grep 'x: 1; y: Hola; z: alpha' stdout
grep 'x: 1; y: Hola; z: beta' stdout
grep 'x: 1; y: Hola; z: delta' stdout
grep 'x: 2; y: Ciao; z: alpha' stdout
grep 'x: 2; y: Ciao; z: beta' stdout
grep 'x: 2; y: Ciao; z: delta' stdout
grep 'x: 2; y: Hola; z: alpha' stdout
grep 'x: 2; y: Hola; z: beta' stdout
grep 'x: 2; y: Hola; z: delta' stdout
grep -F 'foo [a, b]' stdout
grep -F 'foo [c, d]' stdout