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add nextflow d30e48d

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Kevin
2026-04-29 23:01:54 +02:00
parent d0b12d668d
commit 97cc9058d3
2840 changed files with 730250 additions and 0 deletions
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15
nextflow/tests-v1/checks/chunk.nf/.checks Normal file
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@@ -0,0 +1,15 @@
set -e
#
# run normal mode
#
$NXF_RUN --chunkSize 3 < .data.fa | tee .stdout
[[ `grep -c 'Submitted process > foo' .nextflow.log` == 2 ]] || false
#
# run resume mode
#
$NXF_RUN -resume --chunkSize 3 < .data.fa | tee .stdout
[[ `grep -c 'Cached process > foo' .nextflow.log` == 2 ]] || false

14
nextflow/tests-v1/checks/chunk.nf/.data.fa Normal file
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@@ -0,0 +1,14 @@
>1aboA
NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPS
NYITPVN
>1ycsB
KGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGY
VPRNLLGLYP
>1pht
GYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIG
WLNGYNETTGERGDFPGTYVEYIGRKKISP
>1vie
DRVRKKSGAAWQGQIVGWYCTNLTPEGYAVESEAHPGSVQIYPVAALERI
N
>1ihvA
NFRVYYRDSRDPVWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRD