add nextflow d30e48d

This commit is contained in:
2026-04-29 23:01:54 +02:00
parent d0b12d668d
commit 97cc9058d3
2840 changed files with 730250 additions and 0 deletions

View File

@@ -0,0 +1,20 @@
set -e
#
# run normal mode
#
$NXF_RUN $WITH_DOCKER | tee .stdout
[[ `grep INFO .nextflow.log | grep -c 'Submitted process > blast'` == 5 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Submitted process > sort'` == 1 ]] || false
diff .expected .stdout || false
#
# run resume mode
#
$NXF_RUN $WITH_DOCKER -resume | tee .stdout
[[ `grep INFO .nextflow.log | grep -c 'Cached process > blast'` == 5 ]] || false
[[ `grep INFO .nextflow.log | grep -c 'Cached process > sort'` == 1 ]] || false
diff .expected .stdout || false