add nextflow d30e48d

This commit is contained in:
2026-04-29 23:01:54 +02:00
parent d0b12d668d
commit 97cc9058d3
2840 changed files with 730250 additions and 0 deletions

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@@ -0,0 +1,21 @@
set -e
#
# run normal mode
#
echo ''
$NXF_RUN | tee stdout
[[ `grep 'INFO' .nextflow.log | grep -c 'Submitted process '` == 1 ]] || false
[[ -f outputDir/testFile.txt ]] || false
[[ -L outputDir/testFileLink.txt ]] || false
#
# run resume mode
#
rm -rf outputDir
$NXF_RUN -resume | tee stdout
[[ `grep 'INFO' .nextflow.log | grep -c 'Cached process '` == 1 ]] || false
[[ -f outputDir/testFile.txt ]] || false
[[ -L outputDir/testFileLink.txt ]] || false