add nextflow d30e48d

2026-04-29 23:01:54 +02:00
parent d0b12d668d
commit 97cc9058d3
2840 changed files with 730250 additions and 0 deletions
--- a/nextflow/tests/checks/config-secrets.nf/.checks
+++ b/nextflow/tests/checks/config-secrets.nf/.checks
@@ -0,0 +1,11 @@
+
+set -e
+
+$NXF_CMD secrets set MY_SECRET hello-world
+
+$NXF_RUN -c ../../config-secrets.config | tee stdout
+
+< .nextflow.log grep "Config file used secrets -- reloading config with secrets provider" || false
+< stdout grep "outputDir: results-hello-world" || false
+
+$NXF_CMD secrets delete MY_SECRET