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add nextflow d30e48d

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Kevin
2026-04-29 23:01:54 +02:00
parent d0b12d668d
commit 97cc9058d3
2840 changed files with 730250 additions and 0 deletions
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21
nextflow/tests/checks/buffer.nf/.checks Normal file
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@@ -0,0 +1,21 @@
set -e
#
# run normal mode
#
$NXF_RUN | tee .stdout
[[ `grep -c 'Submitted process > blastThemAll' .nextflow.log` == 3 ]] || false
[[ `grep -c 'p1.fa p2.fa' .stdout` == 1 ]] || false
[[ `grep -c 'p3.fa p4.fa' .stdout` == 1 ]] || false
[[ `grep -c 'p5.fa' .stdout` == 1 ]] || false
#
# run resume mode
#
$NXF_RUN -resume | tee .stdout
[[ `grep -c 'Cached process > blastThemAll' .nextflow.log` == 3 ]] || false
[[ `grep -c 'p1.fa p2.fa' .stdout` == 1 ]] || false
[[ `grep -c 'p3.fa p4.fa' .stdout` == 1 ]] || false
[[ `grep -c 'p5.fa' .stdout` == 1 ]] || false