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add nextflow d30e48d

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Kevin
2026-04-29 23:01:54 +02:00
parent d0b12d668d
commit 97cc9058d3
2840 changed files with 730250 additions and 0 deletions
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17
nextflow/tests/checks/ampa.nf/.checks Normal file
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#
# run normal mode
#
$NXF_RUN $WITH_DOCKER --out result.txt | tee .stdout
[[ `grep INFO .nextflow.log | grep -c 'Submitted process'` == 5 ]] || false
cmp .expected <(sort .stdout) || false
#
# run resume mode
#
$NXF_RUN $WITH_DOCKER --out result.txt -resume | tee .stdout
[[ `grep INFO .nextflow.log | grep -c 'Cached process'` == 5 ]] || false
cmp .expected <(sort .stdout) || false

15
nextflow/tests/checks/ampa.nf/.expected Normal file
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# This protein has 0 bactericidal stretches
# This protein has 0 bactericidal stretches
# This protein has 0 bactericidal stretches
# This protein has 0 bactericidal stretches
# This protein has 0 bactericidal stretches
# This protein has a mean antimicrobial value of 0.235
# This protein has a mean antimicrobial value of 0.25
# This protein has a mean antimicrobial value of 0.251
# This protein has a mean antimicrobial value of 0.266
# This protein has a mean antimicrobial value of 0.28