add nextflow d30e48d

nextflow/release.sh

@@ -0,0 +1,94 @@
+#!/bin/bash
+#
+# Nextflow Release Script
+#
+# This script performs the complete Nextflow release process including:
+# - Building and assembling artifacts
+# - Uploading to S3 and Maven repositories 
+# - Releasing plugins to registry
+# - Creating GitHub releases with signed artifacts
+#
+# REQUIRED SECRETS/ENVIRONMENT VARIABLES FOR GITHUB ACTIONS:
+#
+# AWS S3 Deployment:
+#   NXF_AWS_ACCESS       - AWS Access Key for deploying to s3://www2.nextflow.io
+#   NXF_AWS_SECRET       - AWS Secret Key for S3 deployment
+#
+# Maven Repository (Seqera S3-based):
+#   AWS_ACCESS_KEY_ID    - AWS credentials for Maven repository access
+#   AWS_SECRET_ACCESS_KEY - AWS secret for Maven repository access
+#
+# GitHub Integration:
+#   GITHUB_TOKEN         - For creating releases and uploading assets
+#
+# Plugin Registry:
+#   NPR_API_URL          - Nextflow Plugin Registry API URL
+#   NPR_API_KEY          - Nextflow Plugin Registry API key
+#
+# Container Registry Authentication:
+#   DOCKERHUB_USERNAME   - Docker Hub username for container publishing
+#   DOCKERHUB_TOKEN      - Docker Hub token/password for container publishing
+#   SEQERA_PUBLIC_CR_PASSWORD - Seqera public container registry password
+#
+# Usage: Only run when commit message contains '[release]'
+#
+set -e
+
+echo "=== Starting Nextflow Release Process ==="
+echo "Commit message: ${GITHUB_HEAD_COMMIT_MESSAGE:-$(git log -1 --pretty=format:'%s')}"
+
+# Check required environment variables
+echo "=== Checking required environment variables ==="
+REQUIRED_VARS=(
+    "NXF_AWS_ACCESS"
+    "NXF_AWS_SECRET"
+    "AWS_ACCESS_KEY_ID"
+    "AWS_SECRET_ACCESS_KEY"
+    "GITHUB_TOKEN"
+    "GITHUB_RUN_NUMBER"
+    "GITHUB_SHA"
+    "NPR_API_URL"
+    "NPR_API_KEY"
+)
+
+MISSING_VARS=()
+for var in "${REQUIRED_VARS[@]}"; do
+    if [ -z "${!var}" ]; then
+        MISSING_VARS+=("$var")
+    else
+        echo "✓ $var is set"
+    fi
+done
+
+if [ ${#MISSING_VARS[@]} -ne 0 ]; then
+    echo "❌ ERROR: The following required environment variables are not set:"
+    for var in "${MISSING_VARS[@]}"; do
+        echo "  - $var"
+    done
+    echo "Please ensure all required environment variables are configured before running the release."
+    exit 1
+fi
+
+echo "✅ All required environment variables are set"
+
+echo "🔧 === Step 1: Assemble, upload, and deploy ==="
+make assemble upload deploy
+echo "✅ Step 1 completed successfully"
+echo ""
+
+echo "📦 === Step 2: Publish artifacts ==="
+make publish-artifacts
+echo "✅ Step 2 completed successfully"
+echo ""
+
+echo "🔌 === Step 3: Release plugins ==="
+make release-plugins
+echo "✅ Step 3 completed successfully"
+echo ""
+
+echo "🚀 === Step 4: Final release ==="
+make release
+echo "✅ Step 4 completed successfully"
+echo ""
+
+echo "🎉 === Release process completed successfully ==="