add nextflow d30e48d

nextflow/plugins/nf-tower/build.gradle

@@ -0,0 +1,75 @@
+/*
+ * Copyright 2013-2026, Seqera Labs
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+plugins {
+    id 'io.nextflow.nextflow-plugin' version "${nextflowPluginVersion}"
+    id 'java-test-fixtures'
+}
+
+nextflowPlugin {
+    nextflowVersion = '26.04.0'
+
+    provider = "${nextflowPluginProvider}"
+    description = 'Integrates with Seqera Platform for comprehensive workflow monitoring, resource tracking, and cache management capabilities'
+    className = 'io.seqera.tower.plugin.TowerPlugin'
+    useDefaultDependencies = false
+    generateSpec = false
+    extensionPoints = [
+        'io.seqera.tower.plugin.TowerConfig',
+        'io.seqera.tower.plugin.TowerFactory',
+        'io.seqera.tower.plugin.TowerFusionToken',
+        'io.seqera.tower.plugin.auth.AuthCommandImpl',
+        'io.seqera.tower.plugin.launch.LaunchCommandImpl',
+        'io.seqera.tower.plugin.fs.SeqeraPathFactory'
+    ]
+}
+
+sourceSets {
+    main.java.srcDirs = []
+    main.groovy.srcDirs = ['src/main']
+    main.resources.srcDirs = ['src/resources']
+    test.groovy.srcDirs = ['src/test']
+    test.java.srcDirs = []
+    test.resources.srcDirs = []
+}
+
+configurations {
+    // see https://docs.gradle.org/4.1/userguide/dependency_management.html#sub:exclude_transitive_dependencies
+    runtimeClasspath.exclude group: 'org.slf4j', module: 'slf4j-api'
+}
+
+dependencies {
+    compileOnly project(':nextflow')
+    compileOnly 'org.slf4j:slf4j-api:2.0.17'
+    compileOnly 'org.pf4j:pf4j:3.14.1'
+    compileOnly 'io.seqera:lib-httpx:2.1.0'
+    api 'io.seqera:lib-platform-oidc:0.1.0'
+
+    api('io.seqera:tower-api:1.121.0') {
+        exclude group: 'io.micronaut.servlet'
+    }
+    api "com.fasterxml.jackson.dataformat:jackson-dataformat-yaml:2.21.1"
+    api "com.fasterxml.jackson.core:jackson-databind:2.21.1"
+
+    testImplementation(testFixtures(project(":nextflow")))
+    testImplementation "org.apache.groovy:groovy:4.0.31"
+    testImplementation "org.apache.groovy:groovy-nio:4.0.31"
+    testImplementation "org.apache.groovy:groovy-json:4.0.31"
+    // wiremock required by TowerFusionEnvTest
+    testImplementation "org.wiremock:wiremock:3.13.1"
+    // Address security vulnerabilities CVE-2022-45688 and CVE-2023-5072
+    testImplementation 'org.json:json:20240303'
+}